Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1BO75841 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.61□□□□□ -0.07
UPK1BO75841 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1BO75841 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1BO75841 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.61□□□□□ -0.07
UPK1BO75841 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.61□□□□□ -0.07
UPK1BO75841 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
UPK1BO75841 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 AC041040.2-201ENST00000622926 2899 ntBASIC14.61□□□□□ -0.07
UPK1BO75841 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK1BO75841 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
UPK1BO75841 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK1BO75841 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK1BO75841 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.6□□□□□ -0.07
UPK1BO75841 AC015656.1-201ENST00000624209 3578 ntBASIC14.6□□□□□ -0.07
UPK1BO75841 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
UPK1BO75841 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
UPK1BO75841 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 FLJ16779-201ENST00000612722 7638 ntBASIC14.6□□□□□ -0.07
UPK1BO75841 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1BO75841 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1BO75841 ID1-201ENST00000376105 1233 ntBASIC14.6□□□□□ -0.07
UPK1BO75841 KRASP1-201ENST00000407852 552 ntBASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.6□□□□□ -0.07
UPK1BO75841 KRT18P5-201ENST00000436075 1291 ntBASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 MFAP1P1-201ENST00000442257 1255 ntBASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK1BO75841 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1BO75841 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1BO75841 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
UPK1BO75841 CR392000.1-201ENST00000624770 1228 ntBASIC14.6□□□□□ -0.07
UPK1BO75841 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1BO75841 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UPK1BO75841 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
UPK1BO75841 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK1BO75841 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UPK1BO75841 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK1BO75841 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
UPK1BO75841 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
UPK1BO75841 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
UPK1BO75841 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
UPK1BO75841 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.59□□□□□ -0.07
UPK1BO75841 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.59□□□□□ -0.07
UPK1BO75841 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UPK1BO75841 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms