Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.85■□□□□ 0.29
GPC4O75487 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GPC4O75487 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 AC008894.3-201ENST00000624324 3103 ntBASIC16.84■□□□□ 0.29
GPC4O75487 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.84■□□□□ 0.29
GPC4O75487 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GPC4O75487 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.84■□□□□ 0.29
GPC4O75487 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.84■□□□□ 0.29
GPC4O75487 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GPC4O75487 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GPC4O75487 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.84■□□□□ 0.29
GPC4O75487 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.84■□□□□ 0.29
GPC4O75487 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
GPC4O75487 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GPC4O75487 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GPC4O75487 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 AC073621.1-201ENST00000392730 636 ntBASIC16.83■□□□□ 0.28
GPC4O75487 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
GPC4O75487 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GPC4O75487 MRPL3P1-201ENST00000400109 1033 ntBASIC16.83■□□□□ 0.28
GPC4O75487 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.83■□□□□ 0.28
GPC4O75487 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GPC4O75487 FRMD8P1-201ENST00000440433 1524 ntBASIC16.83■□□□□ 0.28
GPC4O75487 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.83■□□□□ 0.28
GPC4O75487 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.83■□□□□ 0.28
GPC4O75487 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.83■□□□□ 0.28
GPC4O75487 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.83■□□□□ 0.28
GPC4O75487 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.83■□□□□ 0.28
GPC4O75487 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
GPC4O75487 AC006504.4-201ENST00000592118 1568 ntBASIC16.83■□□□□ 0.28
GPC4O75487 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.83■□□□□ 0.28
GPC4O75487 AC008735.5-201ENST00000623544 497 ntBASIC16.83■□□□□ 0.28
GPC4O75487 FAM215A-202ENST00000632077 792 ntBASIC16.83■□□□□ 0.28
GPC4O75487 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.83■□□□□ 0.28
GPC4O75487 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GPC4O75487 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GPC4O75487 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
GPC4O75487 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GPC4O75487 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC4O75487 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GPC4O75487 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
GPC4O75487 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.82■□□□□ 0.28
GPC4O75487 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.82■□□□□ 0.28
GPC4O75487 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.82■□□□□ 0.28
GPC4O75487 AP002414.1-201ENST00000391405 1147 ntBASIC16.82■□□□□ 0.28
GPC4O75487 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms