Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CFL1-214ENST00000534769 758 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC7.34□□□□□ -1.23
USH2AO75445 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
USH2AO75445 MIR1227-201ENST00000408484 88 ntBASIC7.34□□□□□ -1.23
USH2AO75445 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 QPRT-203ENST00000562473 579 ntTSL 3 BASIC7.34□□□□□ -1.23
USH2AO75445 FGFR3P5-201ENST00000564496 886 ntBASIC7.34□□□□□ -1.23
USH2AO75445 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 AC073352.2-201ENST00000609385 439 ntBASIC7.34□□□□□ -1.23
USH2AO75445 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC7.34□□□□□ -1.23
USH2AO75445 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC7.34□□□□□ -1.23
USH2AO75445 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 AC012317.2-201ENST00000623305 2251 ntBASIC7.34□□□□□ -1.23
USH2AO75445 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
USH2AO75445 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
USH2AO75445 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC7.34□□□□□ -1.24
USH2AO75445 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
USH2AO75445 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.24
USH2AO75445 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.24
USH2AO75445 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
USH2AO75445 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
USH2AO75445 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
USH2AO75445 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
USH2AO75445 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
USH2AO75445 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC7.34□□□□□ -1.24
USH2AO75445 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC7.34□□□□□ -1.24
USH2AO75445 AC126915.1-201ENST00000522847 1038 ntBASIC7.34□□□□□ -1.24
USH2AO75445 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC7.34□□□□□ -1.24
USH2AO75445 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
USH2AO75445 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 IMPDH1P4-201ENST00000445028 1534 ntBASIC7.33□□□□□ -1.24
USH2AO75445 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 Z93015.1-201ENST00000451718 390 ntBASIC7.33□□□□□ -1.24
USH2AO75445 AC008267.1-201ENST00000474858 1069 ntBASIC7.33□□□□□ -1.24
USH2AO75445 AC098859.1-201ENST00000502915 1238 ntBASIC7.33□□□□□ -1.24
USH2AO75445 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC7.33□□□□□ -1.24
USH2AO75445 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC7.33□□□□□ -1.24
USH2AO75445 INO80C-210ENST00000590757 595 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 HLA-H-201ENST00000383620 1096 ntBASIC7.33□□□□□ -1.24
USH2AO75445 CNN2P8-201ENST00000421872 913 ntBASIC7.33□□□□□ -1.24
USH2AO75445 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 PPOX-204ENST00000462866 473 ntTSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 AC018635.2-201ENST00000608625 364 ntBASIC7.33□□□□□ -1.24
USH2AO75445 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC7.33□□□□□ -1.24
USH2AO75445 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC7.33□□□□□ -1.24
USH2AO75445 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
USH2AO75445 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
USH2AO75445 MGST3-203ENST00000367885 680 ntTSL 2 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms