Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRCH4O75427 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH4O75427 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH4O75427 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH4O75427 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LRCH4O75427 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH4O75427 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.4■□□□□ 0.38
LRCH4O75427 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH4O75427 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.4■□□□□ 0.38
LRCH4O75427 Z83851.2-201ENST00000609564 659 ntBASIC17.4■□□□□ 0.38
LRCH4O75427 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LRCH4O75427 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
LRCH4O75427 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.4■□□□□ 0.38
LRCH4O75427 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRCH4O75427 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRCH4O75427 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LRCH4O75427 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.39■□□□□ 0.38
LRCH4O75427 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LRCH4O75427 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRCH4O75427 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
LRCH4O75427 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRCH4O75427 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRCH4O75427 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.39■□□□□ 0.37
LRCH4O75427 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRCH4O75427 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.39■□□□□ 0.37
LRCH4O75427 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 HMGA1P7-201ENST00000406908 502 ntBASIC17.39■□□□□ 0.37
LRCH4O75427 CRYGEP-201ENST00000412192 528 ntBASIC17.39■□□□□ 0.37
LRCH4O75427 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LRCH4O75427 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LRCH4O75427 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.39■□□□□ 0.37
LRCH4O75427 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.39■□□□□ 0.37
LRCH4O75427 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LRCH4O75427 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.39■□□□□ 0.37
LRCH4O75427 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.39■□□□□ 0.37
LRCH4O75427 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.39■□□□□ 0.37
LRCH4O75427 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRCH4O75427 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
LRCH4O75427 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LRCH4O75427 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.38■□□□□ 0.37
LRCH4O75427 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LRCH4O75427 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRCH4O75427 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
LRCH4O75427 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.38■□□□□ 0.37
LRCH4O75427 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRCH4O75427 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 FDX1P1-201ENST00000449115 551 ntBASIC17.38■□□□□ 0.37
LRCH4O75427 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.38■□□□□ 0.37
LRCH4O75427 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms