Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE3O75131 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CPNE3O75131 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CPNE3O75131 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CPNE3O75131 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE3O75131 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CPNE3O75131 AC092919.2-201ENST00000623631 1645 ntBASIC16.12■□□□□ 0.17
CPNE3O75131 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE3O75131 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE3O75131 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE3O75131 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CPNE3O75131 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.11■□□□□ 0.17
CPNE3O75131 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CPNE3O75131 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE3O75131 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.11■□□□□ 0.17
CPNE3O75131 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE3O75131 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE3O75131 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE3O75131 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CPNE3O75131 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 AC022211.2-201ENST00000585075 2527 ntBASIC16.11■□□□□ 0.17
CPNE3O75131 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CPNE3O75131 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE3O75131 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.11■□□□□ 0.17
CPNE3O75131 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CPNE3O75131 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE3O75131 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CPNE3O75131 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.1■□□□□ 0.17
CPNE3O75131 AC005412.3-201ENST00000580309 715 ntBASIC16.1■□□□□ 0.17
CPNE3O75131 AC004835.2-201ENST00000603762 682 ntBASIC16.1■□□□□ 0.17
CPNE3O75131 AL355385.1-201ENST00000606123 409 ntBASIC16.1■□□□□ 0.17
CPNE3O75131 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE3O75131 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CPNE3O75131 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE3O75131 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 UBALD1-205ENST00000590891 2641 ntBASIC16.1■□□□□ 0.17
CPNE3O75131 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE3O75131 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CPNE3O75131 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE3O75131 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE3O75131 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms