Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.81■□□□□ 0.44
RCCD1A6NED2 AC002310.6-201ENST00000624451 1377 ntBASIC17.81■□□□□ 0.44
RCCD1A6NED2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.81■□□□□ 0.44
RCCD1A6NED2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.81■□□□□ 0.44
RCCD1A6NED2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RCCD1A6NED2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.81■□□□□ 0.44
RCCD1A6NED2 NKAPP1-205ENST00000585790 367 ntBASIC17.81■□□□□ 0.44
RCCD1A6NED2 AL591684.3-201ENST00000605187 298 ntBASIC17.81■□□□□ 0.44
RCCD1A6NED2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 AL590326.2-201ENST00000625139 305 ntBASIC17.81■□□□□ 0.44
RCCD1A6NED2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.81■□□□□ 0.44
RCCD1A6NED2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 SLC22A20-204ENST00000530038 1673 ntBASIC17.8■□□□□ 0.44
RCCD1A6NED2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 AL049597.2-201ENST00000565575 961 ntBASIC17.8■□□□□ 0.44
RCCD1A6NED2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.8■□□□□ 0.44
RCCD1A6NED2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 NCF1C-201ENST00000438382 1427 ntBASIC17.8■□□□□ 0.44
RCCD1A6NED2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RCCD1A6NED2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.8■□□□□ 0.44
RCCD1A6NED2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 AL139424.1-201ENST00000607572 797 ntBASIC17.79■□□□□ 0.44
RCCD1A6NED2 AC092119.3-201ENST00000612618 583 ntBASIC17.79■□□□□ 0.44
RCCD1A6NED2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 AC112504.1-201ENST00000623415 1841 ntBASIC17.79■□□□□ 0.44
RCCD1A6NED2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 AC023824.1-201ENST00000562945 2975 ntBASIC17.79■□□□□ 0.44
RCCD1A6NED2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RCCD1A6NED2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.79■□□□□ 0.44
RCCD1A6NED2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 AP005117.1-202ENST00000581724 1908 ntBASIC17.78■□□□□ 0.44
RCCD1A6NED2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RCCD1A6NED2 PMS2P1-201ENST00000431037 1228 ntBASIC17.78■□□□□ 0.44
RCCD1A6NED2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RCCD1A6NED2 AC087163.2-201ENST00000457299 853 ntBASIC17.78■□□□□ 0.44
RCCD1A6NED2 AC106795.1-205ENST00000512851 1056 ntBASIC17.78■□□□□ 0.44
RCCD1A6NED2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms