Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 AL049757.1-201ENST00000616842 1596 ntBASIC18.23■□□□□ 0.51
CCDC66A2RUB6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 AL138831.2-201ENST00000606564 490 ntBASIC18.23■□□□□ 0.51
CCDC66A2RUB6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.23■□□□□ 0.51
CCDC66A2RUB6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 AL365203.3-201ENST00000609742 2057 ntBASIC18.22■□□□□ 0.51
CCDC66A2RUB6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 CICP4-201ENST00000447359 2812 ntBASIC18.22■□□□□ 0.51
CCDC66A2RUB6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 TSPY22P-201ENST00000427496 604 ntBASIC18.22■□□□□ 0.51
CCDC66A2RUB6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 AC124947.2-201ENST00000547118 1133 ntBASIC18.22■□□□□ 0.51
CCDC66A2RUB6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 AL592071.1-201ENST00000611956 408 ntBASIC18.22■□□□□ 0.51
CCDC66A2RUB6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 AC079328.2-201ENST00000561241 3354 ntBASIC18.22■□□□□ 0.51
CCDC66A2RUB6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC66A2RUB6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 AL671277.2-201ENST00000458060 996 ntBASIC18.21■□□□□ 0.51
CCDC66A2RUB6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 AC090616.6-201ENST00000582640 721 ntBASIC18.21■□□□□ 0.51
CCDC66A2RUB6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.21■□□□□ 0.51
CCDC66A2RUB6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC66A2RUB6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms