Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 AC117947.1-201ENST00000427448 529 ntBASIC14.61□□□□□ -0.07
SHISA3A0PJX4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 AC016027.1-202ENST00000607927 1699 ntBASIC14.61□□□□□ -0.07
SHISA3A0PJX4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 AC069224.1-201ENST00000566372 1715 ntBASIC14.61□□□□□ -0.07
SHISA3A0PJX4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 AC011467.2-201ENST00000598425 242 ntBASIC14.6□□□□□ -0.07
SHISA3A0PJX4 LINC01023-201ENST00000606054 436 ntBASIC14.6□□□□□ -0.07
SHISA3A0PJX4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SHISA3A0PJX4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.59□□□□□ -0.07
SHISA3A0PJX4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms