Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 AL592071.1-201ENST00000611956 408 ntBASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRBV3S1A0A5B6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 AC148477.5-201ENST00000625164 1645 ntBASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 PRAL-201ENST00000624952 3286 ntBASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 AC009533.2-201ENST00000543664 586 ntBASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 HYMAI.1-201ENST00000620949 238 ntBASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TCRBV3S1A0A5B6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV3S1A0A5B6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms