Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC079776.2-201ENST00000641154 1609 ntBASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 AL049597.2-201ENST00000565575 961 ntBASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 AL139011.1-202ENST00000642063 584 ntBASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 AL603832.2-201ENST00000566195 2125 ntBASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-7A0A0A0MS04 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC104819.1-201ENST00000504587 486 ntBASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC013467.2-201ENST00000605472 835 ntBASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC010331.1-201ENST00000611423 582 ntBASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 IER3-202ENST00000376377 1350 ntBASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-7A0A0A0MS04 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms