Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.67■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC138932.1-201ENST00000534164 6830 ntBASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC006504.4-201ENST00000592118 1568 ntBASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 PI4KAP1-204ENST00000612579 1703 ntBASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 LINC02447-202ENST00000501888 2146 ntBASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC126177.1-201ENST00000547829 2218 ntBASIC15.66■□□□□ 0.1
TRBV5-3A0A0A0MS03 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC025062.2-201ENST00000605477 670 ntBASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC069224.1-201ENST00000566372 1715 ntBASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV5-3A0A0A0MS03 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRBV5-3A0A0A0MS03 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms