Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 FRMD8P1-201ENST00000440433 1524 ntBASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 KRT18P3-201ENST00000451602 1288 ntBASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AC124947.2-201ENST00000547118 1133 ntBASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AC140113.2-201ENST00000604370 208 ntBASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 AL596257.1-201ENST00000641463 2694 ntBASIC15.9■□□□□ 0.14
CLCA3PQ9Y6N3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 AC064836.3-201ENST00000607928 673 ntBASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 AL121761.2-201ENST00000598007 1648 ntBASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA3PQ9Y6N3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 AC002310.6-201ENST00000624451 1377 ntBASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 AC092053.1-201ENST00000605787 1936 ntBASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
CLCA3PQ9Y6N3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms