Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA11Q9Y5H2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 RPS2P1-201ENST00000434010 821 ntBASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 DUSP5P1-201ENST00000441325 1139 ntBASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 AC087163.2-201ENST00000457299 853 ntBASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 EMBP1-201ENST00000458200 901 ntBASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 AC013467.2-201ENST00000605472 835 ntBASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA11Q9Y5H2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 RPS2P28-201ENST00000314255 741 ntBASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 KRT18P27-201ENST00000427733 1299 ntBASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 FAM197Y8-203ENST00000450145 560 ntBASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 AC136632.2-201ENST00000512891 861 ntBASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA11Q9Y5H2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 CYP2T1P-202ENST00000641596 2535 ntBASIC16.27■□□□□ 0.2
PCDHGA11Q9Y5H2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms