Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 MIR6786-201ENST00000616843 113 ntBASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHTOPQ9Y3Y2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AC018442.1-201ENST00000421439 2061 ntBASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AC006538.1-201ENST00000567905 1585 ntBASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 KRT8P47-201ENST00000604727 1398 ntBASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 KRT17P3-201ENST00000420566 1262 ntBASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 MIR4674-201ENST00000582457 87 ntBASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AP000692.2-201ENST00000608391 879 ntBASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 AC112497.1-201ENST00000624824 639 ntBASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CHTOPQ9Y3Y2 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHTOPQ9Y3Y2 HLA-A-202ENST00000376806 1854 ntBASIC12.1□□□□□ -0.47
CHTOPQ9Y3Y2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CHTOPQ9Y3Y2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.1□□□□□ -0.47
CHTOPQ9Y3Y2 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHTOPQ9Y3Y2 MTHFR-217ENST00000641820 1569 ntBASIC12.1□□□□□ -0.47
CHTOPQ9Y3Y2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHTOPQ9Y3Y2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.1□□□□□ -0.47
CHTOPQ9Y3Y2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms