Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRIM35Q9UPQ4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AC073439.1-201ENST00000624121 1774 ntBASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AL139400.1-201ENST00000366220 510 ntBASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 GPS2P2-201ENST00000430745 888 ntBASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AL592309.1-201ENST00000443127 649 ntBASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 KRT18P34-201ENST00000488218 1270 ntBASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AC027307.2-201ENST00000591252 911 ntBASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AC073389.1-201ENST00000595595 795 ntBASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM35Q9UPQ4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 AL627223.1-201ENST00000416693 442 ntBASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 AC008267.7-201ENST00000624570 1194 ntBASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 AP001002.2-201ENST00000625137 386 ntBASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM35Q9UPQ4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM35Q9UPQ4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.64■■□□□ 1.06
TRIM35Q9UPQ4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM35Q9UPQ4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM35Q9UPQ4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM35Q9UPQ4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.64■■□□□ 1.06
TRIM35Q9UPQ4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM35Q9UPQ4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 AC142381.1-201ENST00000426099 345 ntBASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 AC092183.1-201ENST00000469884 875 ntBASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM35Q9UPQ4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM35Q9UPQ4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms