Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 AC092905.1-201ENST00000467527 949 ntBASIC15.91■□□□□ 0.14
LHX6Q9UPM6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 LINC01225-203ENST00000563550 1244 ntBASIC15.91■□□□□ 0.14
LHX6Q9UPM6 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 RN7SL219P-201ENST00000582872 296 ntBASIC15.91■□□□□ 0.14
LHX6Q9UPM6 MIR4259-201ENST00000584466 101 ntBASIC15.91■□□□□ 0.14
LHX6Q9UPM6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 AC099568.2-201ENST00000609194 695 ntBASIC15.91■□□□□ 0.14
LHX6Q9UPM6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LHX6Q9UPM6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 ANKRD19P-201ENST00000338192 862 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 LINC00982-205ENST00000420957 435 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 AC117500.1-201ENST00000497352 755 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 ALG1L8P-201ENST00000533887 760 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 RN7SL190P-201ENST00000582519 257 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 STK25P1-201ENST00000585406 838 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 AC135178.5-201ENST00000602597 674 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 AC133552.6-201ENST00000613406 534 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 AC129492.6-201ENST00000611383 1305 ntBASIC15.9■□□□□ 0.14
LHX6Q9UPM6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LHX6Q9UPM6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 AL096828.2-201ENST00000567259 1965 ntBASIC15.89■□□□□ 0.13
LHX6Q9UPM6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 PAICSP2-201ENST00000429118 1150 ntBASIC15.89■□□□□ 0.13
LHX6Q9UPM6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 KRT223P-202ENST00000449164 1292 ntBASIC15.89■□□□□ 0.13
LHX6Q9UPM6 STK19B-204ENST00000512515 211 ntBASIC15.89■□□□□ 0.13
LHX6Q9UPM6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.89■□□□□ 0.13
LHX6Q9UPM6 MIR4453-201ENST00000584019 89 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms