Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 MED15P5-201ENST00000423150 992 ntBASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 AC140658.5-201ENST00000438532 169 ntBASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 KRT18P3-201ENST00000451602 1288 ntBASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 RNA5SP416-201ENST00000516838 111 ntBASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGC3Q9UN70 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 PDPK2P-202ENST00000562415 1191 ntBASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 AL009183.1-201ENST00000603760 355 ntBASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 AC020765.3-201ENST00000613051 740 ntBASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 PCGF3-213ENST00000620529 1899 ntBASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGC3Q9UN70 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 LINC01144-201ENST00000626198 1710 ntBASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC3Q9UN70 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGC3Q9UN70 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms