Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.22■□□□□ 0.83
DENND2AQ9ULE3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DENND2AQ9ULE3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
DENND2AQ9ULE3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DENND2AQ9ULE3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DENND2AQ9ULE3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DENND2AQ9ULE3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 SNX33P1-201ENST00000592116 1762 ntBASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 AP002490.2-201ENST00000524791 560 ntBASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DENND2AQ9ULE3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
DENND2AQ9ULE3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 ALG1L8P-201ENST00000533887 760 ntBASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 AC051619.7-201ENST00000568314 623 ntBASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 AC073389.1-201ENST00000595595 795 ntBASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
DENND2AQ9ULE3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 SPDYE7P-202ENST00000420373 878 ntBASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 AC105233.2-201ENST00000523697 349 ntBASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 AF228730.5-201ENST00000530288 346 ntBASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 AL139011.1-202ENST00000642063 584 ntBASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 TUBB3P1-201ENST00000405796 1332 ntBASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DENND2AQ9ULE3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 AL391256.1-201ENST00000443260 1855 ntBASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms