Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 PI4KAP1-204ENST00000612579 1703 ntBASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AC006538.1-201ENST00000567905 1585 ntBASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AC006504.4-201ENST00000592118 1568 ntBASIC15.12■□□□□ 0.01
ZNF346Q9UL40 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AL121894.2-201ENST00000602977 491 ntBASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AC013467.2-201ENST00000605472 835 ntBASIC15.12■□□□□ 0.01
ZNF346Q9UL40 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 AC132872.4-202ENST00000622924 2756 ntBASIC15.12■□□□□ 0.01
ZNF346Q9UL40 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF346Q9UL40 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 TOP3BP1-201ENST00000420768 1380 ntBASIC15.11■□□□□ 0.01
ZNF346Q9UL40 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.11■□□□□ 0.01
ZNF346Q9UL40 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 HLA-J-202ENST00000469281 1241 ntBASIC15.11■□□□□ 0.01
ZNF346Q9UL40 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF346Q9UL40 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF346Q9UL40 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms