Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC105020.1-201ENST00000435356 2205 ntBASIC17.96■□□□□ 0.47
CNTN3Q9P232 AC011676.5-201ENST00000624864 2660 ntBASIC17.96■□□□□ 0.47
CNTN3Q9P232 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 MIR346-201ENST00000362234 95 ntBASIC17.96■□□□□ 0.47
CNTN3Q9P232 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 GPS2P2-201ENST00000430745 888 ntBASIC17.96■□□□□ 0.47
CNTN3Q9P232 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 AC027307.2-201ENST00000591252 911 ntBASIC17.96■□□□□ 0.47
CNTN3Q9P232 LINC00628-201ENST00000628516 1289 ntBASIC17.96■□□□□ 0.47
CNTN3Q9P232 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNTN3Q9P232 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 AC005915.1-201ENST00000624912 2018 ntBASIC17.96■□□□□ 0.47
CNTN3Q9P232 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
CNTN3Q9P232 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNTN3Q9P232 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNTN3Q9P232 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 AL512652.2-201ENST00000625156 1716 ntBASIC17.95■□□□□ 0.46
CNTN3Q9P232 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 HTR7P1-202ENST00000624664 4411 ntBASIC17.95■□□□□ 0.46
CNTN3Q9P232 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 TNRC18P3-201ENST00000441896 2691 ntBASIC17.95■□□□□ 0.46
CNTN3Q9P232 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 AL645939.2-201ENST00000427340 991 ntBASIC17.95■□□□□ 0.46
CNTN3Q9P232 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 RFPL4AP1-201ENST00000530883 850 ntBASIC17.95■□□□□ 0.46
CNTN3Q9P232 AL138918.1-201ENST00000568306 659 ntBASIC17.95■□□□□ 0.46
CNTN3Q9P232 AP000842.3-202ENST00000569238 1080 ntBASIC17.95■□□□□ 0.46
CNTN3Q9P232 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.95■□□□□ 0.46
CNTN3Q9P232 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNTN3Q9P232 AC090340.1-201ENST00000620778 4980 ntBASIC17.94■□□□□ 0.46
CNTN3Q9P232 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.94■□□□□ 0.46
CNTN3Q9P232 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNTN3Q9P232 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.94■□□□□ 0.46
CNTN3Q9P232 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTN3Q9P232 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNTN3Q9P232 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNTN3Q9P232 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.94■□□□□ 0.46
CNTN3Q9P232 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNTN3Q9P232 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms