Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 PMS2P1-201ENST00000431037 1228 ntBASIC15.04■□□□□ -0
PARPBPQ9NWS1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 FAM185BP-201ENST00000443595 716 ntBASIC15.04■□□□□ -0
PARPBPQ9NWS1 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.04■□□□□ -0
PARPBPQ9NWS1 SLC25A6P2-201ENST00000497974 877 ntBASIC15.04■□□□□ -0
PARPBPQ9NWS1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 CXCL1P1-201ENST00000502804 216 ntBASIC15.04■□□□□ -0
PARPBPQ9NWS1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 SLC25A1P1-201ENST00000528351 927 ntBASIC15.04■□□□□ -0
PARPBPQ9NWS1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PARPBPQ9NWS1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PARPBPQ9NWS1 AC092053.1-201ENST00000605787 1936 ntBASIC15.04■□□□□ -0
PARPBPQ9NWS1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 MED15P5-201ENST00000423150 992 ntBASIC15.03■□□□□ -0
PARPBPQ9NWS1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 HCG4B-203ENST00000450128 991 ntBASIC15.03■□□□□ -0
PARPBPQ9NWS1 KRT18P3-201ENST00000451602 1288 ntBASIC15.03■□□□□ -0
PARPBPQ9NWS1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 AC091167.2-201ENST00000579581 588 ntBASIC15.03■□□□□ -0
PARPBPQ9NWS1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 AP001350.2-201ENST00000625104 1094 ntBASIC15.03■□□□□ -0
PARPBPQ9NWS1 AC007064.4-201ENST00000637740 555 ntBASIC15.03■□□□□ -0
PARPBPQ9NWS1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.03■□□□□ -0
PARPBPQ9NWS1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PARPBPQ9NWS1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms