Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.94■□□□□ 0.14
ZNF304Q9HCX3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ZNF304Q9HCX3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.94■□□□□ 0.14
ZNF304Q9HCX3 TUBB7P-202ENST00000428444 1305 ntBASIC15.94■□□□□ 0.14
ZNF304Q9HCX3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.94■□□□□ 0.14
ZNF304Q9HCX3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 AP006288.1-201ENST00000446065 395 ntBASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 DNAJB3-202ENST00000449667 1266 ntBASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 AC087641.1-201ENST00000557561 1021 ntBASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 MPDU1-223ENST00000582151 728 ntBASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 AC092902.6-201ENST00000641783 218 ntBASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 AC131009.4-201ENST00000624048 1740 ntBASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ZNF304Q9HCX3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 SNHG9-202ENST00000564014 471 ntBASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 AP001160.2-201ENST00000596071 487 ntBASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 SLC22A20-204ENST00000530038 1673 ntBASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ZNF304Q9HCX3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms