Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CBX8Q9HC52 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBX8Q9HC52 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 AL031731.1-201ENST00000642131 2094 ntBASIC18.74■□□□□ 0.59
CBX8Q9HC52 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 SPDYE21P-201ENST00000413323 827 ntBASIC18.74■□□□□ 0.59
CBX8Q9HC52 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 AL671277.2-201ENST00000458060 996 ntBASIC18.74■□□□□ 0.59
CBX8Q9HC52 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 KRT8P26-201ENST00000534154 1276 ntBASIC18.74■□□□□ 0.59
CBX8Q9HC52 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 TERC-201ENST00000602385 541 ntBASIC18.74■□□□□ 0.59
CBX8Q9HC52 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.74■□□□□ 0.59
CBX8Q9HC52 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBX8Q9HC52 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CBX8Q9HC52 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 AC013268.4-201ENST00000637413 2228 ntBASIC18.73■□□□□ 0.59
CBX8Q9HC52 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 AC211429.1-201ENST00000415277 523 ntBASIC18.73■□□□□ 0.59
CBX8Q9HC52 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 AP000867.4-201ENST00000641616 219 ntBASIC18.73■□□□□ 0.59
CBX8Q9HC52 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CBX8Q9HC52 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CBX8Q9HC52 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CBX8Q9HC52 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms