Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 EGFEM1P-202ENST00000431685 1563 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 AC010460.3-201ENST00000511359 1579 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 MTHFR-217ENST00000641820 1569 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 HLA-F-220ENST00000434407 884 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ZNF444P1-201ENST00000559497 298 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 AC109462.3-201ENST00000573934 613 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 AL023973.1-201ENST00000624619 620 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 AL391256.1-201ENST00000443260 1855 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 AC092384.3-202ENST00000564646 2873 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 ALOX12P2-203ENST00000570921 1945 ntBASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SND1-IT1Q9HBX3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 AP002414.2-201ENST00000591780 3365 ntBASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SND1-IT1Q9HBX3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms