Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 MED15P5-201ENST00000423150 992 ntBASIC14.69□□□□□ -0.06
CDH20Q9HBT6 AC007967.2-201ENST00000432613 625 ntBASIC14.69□□□□□ -0.06
CDH20Q9HBT6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 AC027601.4-201ENST00000611259 610 ntBASIC14.69□□□□□ -0.06
CDH20Q9HBT6 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 TOP3BP1-201ENST00000420768 1380 ntBASIC14.69□□□□□ -0.06
CDH20Q9HBT6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH20Q9HBT6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 CXCL1P1-201ENST00000502804 216 ntBASIC14.68□□□□□ -0.06
CDH20Q9HBT6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 RNA5SP416-201ENST00000516838 111 ntBASIC14.68□□□□□ -0.06
CDH20Q9HBT6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 AC005412.3-201ENST00000580309 715 ntBASIC14.68□□□□□ -0.06
CDH20Q9HBT6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH20Q9HBT6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms