Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.02■□□□□ 0.16
BRF2Q9HAW0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 AC108073.2-201ENST00000464002 357 ntBASIC16.02■□□□□ 0.16
BRF2Q9HAW0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 AC010654.1-201ENST00000615722 808 ntBASIC16.02■□□□□ 0.16
BRF2Q9HAW0 AC148477.8-201ENST00000624298 468 ntBASIC16.02■□□□□ 0.16
BRF2Q9HAW0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
BRF2Q9HAW0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.01■□□□□ 0.15
BRF2Q9HAW0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 PRSS29P-201ENST00000440800 595 ntBASIC16.01■□□□□ 0.15
BRF2Q9HAW0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 OR7E47P-204ENST00000575924 449 ntBASIC16.01■□□□□ 0.15
BRF2Q9HAW0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.01■□□□□ 0.15
BRF2Q9HAW0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 AL031008.1-201ENST00000619963 541 ntBASIC16.01■□□□□ 0.15
BRF2Q9HAW0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BRF2Q9HAW0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 GPAA1P2-202ENST00000606848 1787 ntBASIC16■□□□□ 0.15
BRF2Q9HAW0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms