Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UPF2Q9HAU5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPF2Q9HAU5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
UPF2Q9HAU5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPF2Q9HAU5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
UPF2Q9HAU5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UPF2Q9HAU5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UPF2Q9HAU5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPF2Q9HAU5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 AC024909.3-201ENST00000611513 2257 ntBASIC20.64■□□□□ 0.89
UPF2Q9HAU5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 AL645929.1-201ENST00000420084 975 ntBASIC20.64■□□□□ 0.89
UPF2Q9HAU5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UPF2Q9HAU5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 AC005052.1-201ENST00000625181 2492 ntBASIC20.63■□□□□ 0.89
UPF2Q9HAU5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 ACTG1P4-201ENST00000425123 1122 ntBASIC20.63■□□□□ 0.89
UPF2Q9HAU5 VENTXP7-201ENST00000475503 772 ntBASIC20.63■□□□□ 0.89
UPF2Q9HAU5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
UPF2Q9HAU5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 AL845331.1-201ENST00000424978 1190 ntBASIC20.62■□□□□ 0.89
UPF2Q9HAU5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 AC246785.2-201ENST00000432512 513 ntBASIC20.62■□□□□ 0.89
UPF2Q9HAU5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPF2Q9HAU5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms