Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AC002056.1-201ENST00000395613 760 ntBASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 RPSAP43-201ENST00000402237 625 ntBASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AP002472.1-201ENST00000577490 586 ntBASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AL031055.1-201ENST00000606362 631 ntBASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AL078644.1-201ENST00000609881 752 ntBASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AC091812.2-201ENST00000619081 385 ntBASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 RNU1-129P-201ENST00000384064 167 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 PMS2P4-201ENST00000412466 1052 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 HTR5BP-201ENST00000430851 1154 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 FAM58CP-201ENST00000435741 640 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 MKNK2P1-201ENST00000437526 628 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 AC005829.1-201ENST00000570002 483 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 MIR3909-201ENST00000579518 119 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 U1.21-201ENST00000580816 167 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A3Q9H7F0 AL645728.1-201ENST00000366221 2101 ntBASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 AC112482.1-201ENST00000492080 688 ntBASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP13A3Q9H7F0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms