Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC097637.2-201ENST00000624096 1997 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 RNU6-673P-201ENST00000365084 104 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 MTND2P11-201ENST00000423638 648 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AL121578.1-201ENST00000428051 892 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 HLA-DPB2-205ENST00000435074 1188 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 KRT18P57-201ENST00000443599 1254 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 SIGLEC30P-201ENST00000455569 941 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC092337.1-201ENST00000568699 1129 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 MTATP6P25-201ENST00000574491 261 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC112187.3-201ENST00000607844 408 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC133561.5-201ENST00000635547 218 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AP000867.4-201ENST00000641616 219 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC013268.4-201ENST00000637413 2228 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 AC006449.6-201ENST00000612330 2296 ntBASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
KRTAP3-1Q9BYR8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 AP005117.1-202ENST00000581724 1908 ntBASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
KRTAP3-1Q9BYR8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms