Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 AL596087.1-201ENST00000400979 1969 ntBASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 PTCHD3P3-201ENST00000403073 906 ntBASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 MTDHP4-201ENST00000600287 670 ntBASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 AC004706.3-202ENST00000621574 984 ntBASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 LINC00554-201ENST00000564841 3011 ntBASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.85■□□□□ 0.45
PACSIN1Q9BY11 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 SLC25A6P2-201ENST00000497974 877 ntBASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 KRT18P31-201ENST00000506277 1292 ntBASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PACSIN1Q9BY11 SLC22A20-204ENST00000530038 1673 ntBASIC17.83■□□□□ 0.45
PACSIN1Q9BY11 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PACSIN1Q9BY11 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.83■□□□□ 0.45
PACSIN1Q9BY11 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PACSIN1Q9BY11 AC006504.4-201ENST00000592118 1568 ntBASIC17.83■□□□□ 0.45
PACSIN1Q9BY11 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.83■□□□□ 0.45
PACSIN1Q9BY11 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PACSIN1Q9BY11 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 ELK2BP-201ENST00000415014 1224 ntBASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 AC139887.3-201ENST00000568585 713 ntBASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PACSIN1Q9BY11 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms