Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 DOC2GP-204ENST00000639052 2548 ntBASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 BX842568.4-201ENST00000421222 227 ntBASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 IGHV3-65-201ENST00000523210 341 ntBASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PCGF1Q9BSM1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 PCDHA1-201ENST00000378133 2726 ntBASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 FLJ38576-201ENST00000623820 2459 ntBASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 AP002414.1-201ENST00000391405 1147 ntBASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 MRPL20P1-201ENST00000400819 433 ntBASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 GGTLC5P-201ENST00000617623 998 ntBASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
PCGF1Q9BSM1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PCGF1Q9BSM1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms