Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAD9AQ99638 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD9AQ99638 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAD9AQ99638 BICD1-207ENST00000551848 1962 ntBASIC17.75■□□□□ 0.43
RAD9AQ99638 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAD9AQ99638 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD9AQ99638 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAD9AQ99638 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAD9AQ99638 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RAD9AQ99638 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAD9AQ99638 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAD9AQ99638 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAD9AQ99638 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.74■□□□□ 0.43
RAD9AQ99638 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.74■□□□□ 0.43
RAD9AQ99638 AC114501.2-201ENST00000439631 535 ntBASIC17.74■□□□□ 0.43
RAD9AQ99638 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.74■□□□□ 0.43
RAD9AQ99638 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.74■□□□□ 0.43
RAD9AQ99638 AC004790.1-201ENST00000612686 536 ntBASIC17.74■□□□□ 0.43
RAD9AQ99638 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.74■□□□□ 0.43
RAD9AQ99638 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAD9AQ99638 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAD9AQ99638 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.73■□□□□ 0.43
RAD9AQ99638 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAD9AQ99638 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAD9AQ99638 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 MEP1AP4-201ENST00000423244 1087 ntBASIC17.73■□□□□ 0.43
RAD9AQ99638 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.73■□□□□ 0.43
RAD9AQ99638 SERBP1P3-201ENST00000459980 809 ntBASIC17.73■□□□□ 0.43
RAD9AQ99638 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.73■□□□□ 0.43
RAD9AQ99638 AC055876.2-201ENST00000531834 546 ntBASIC17.73■□□□□ 0.43
RAD9AQ99638 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.73■□□□□ 0.43
RAD9AQ99638 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAD9AQ99638 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.73■□□□□ 0.43
RAD9AQ99638 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.73■□□□□ 0.43
RAD9AQ99638 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.73■□□□□ 0.43
RAD9AQ99638 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.73■□□□□ 0.43
RAD9AQ99638 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.73■□□□□ 0.43
RAD9AQ99638 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RAD9AQ99638 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAD9AQ99638 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.73■□□□□ 0.43
RAD9AQ99638 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 AC020763.4-201ENST00000623414 4170 ntBASIC17.72■□□□□ 0.43
RAD9AQ99638 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.72■□□□□ 0.43
RAD9AQ99638 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAD9AQ99638 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.72■□□□□ 0.43
RAD9AQ99638 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.72■□□□□ 0.43
RAD9AQ99638 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.72■□□□□ 0.43
RAD9AQ99638 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RAD9AQ99638 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.72■□□□□ 0.43
RAD9AQ99638 RN7SL837P-201ENST00000463010 287 ntBASIC17.72■□□□□ 0.43
RAD9AQ99638 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.72■□□□□ 0.43
RAD9AQ99638 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAD9AQ99638 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.72■□□□□ 0.43
RAD9AQ99638 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.72■□□□□ 0.43
RAD9AQ99638 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAD9AQ99638 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms