Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CDCA3Q99618 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.24■□□□□ 0.35
CDCA3Q99618 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDCA3Q99618 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.24■□□□□ 0.35
CDCA3Q99618 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDCA3Q99618 ELK1P1-201ENST00000485699 580 ntBASIC17.24■□□□□ 0.35
CDCA3Q99618 AC092658.1-201ENST00000505836 891 ntBASIC17.24■□□□□ 0.35
CDCA3Q99618 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.24■□□□□ 0.35
CDCA3Q99618 AC061975.2-201ENST00000581722 295 ntBASIC17.24■□□□□ 0.35
CDCA3Q99618 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.24■□□□□ 0.35
CDCA3Q99618 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.24■□□□□ 0.35
CDCA3Q99618 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDCA3Q99618 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.24■□□□□ 0.35
CDCA3Q99618 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CDCA3Q99618 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 LINC02012-201ENST00000608206 1725 ntBASIC17.24■□□□□ 0.35
CDCA3Q99618 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDCA3Q99618 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.23■□□□□ 0.35
CDCA3Q99618 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.23■□□□□ 0.35
CDCA3Q99618 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.23■□□□□ 0.35
CDCA3Q99618 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.23■□□□□ 0.35
CDCA3Q99618 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.23■□□□□ 0.35
CDCA3Q99618 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
CDCA3Q99618 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CDCA3Q99618 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.23■□□□□ 0.35
CDCA3Q99618 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.23■□□□□ 0.35
CDCA3Q99618 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDCA3Q99618 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDCA3Q99618 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.23■□□□□ 0.35
CDCA3Q99618 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.23■□□□□ 0.35
CDCA3Q99618 AC023310.3-201ENST00000557027 670 ntBASIC17.23■□□□□ 0.35
CDCA3Q99618 AC100756.1-201ENST00000562736 682 ntBASIC17.23■□□□□ 0.35
CDCA3Q99618 AC138749.3-201ENST00000567691 622 ntBASIC17.23■□□□□ 0.35
CDCA3Q99618 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.23■□□□□ 0.35
CDCA3Q99618 AC116165.1-201ENST00000611806 668 ntBASIC17.23■□□□□ 0.35
CDCA3Q99618 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.23■□□□□ 0.35
CDCA3Q99618 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.23■□□□□ 0.35
CDCA3Q99618 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDCA3Q99618 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.23■□□□□ 0.35
CDCA3Q99618 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 AL671710.1-201ENST00000610245 2349 ntBASIC17.22■□□□□ 0.35
CDCA3Q99618 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDCA3Q99618 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.22■□□□□ 0.35
CDCA3Q99618 AL589702.1-201ENST00000641229 1509 ntBASIC17.22■□□□□ 0.35
CDCA3Q99618 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.22■□□□□ 0.35
CDCA3Q99618 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.22■□□□□ 0.35
CDCA3Q99618 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDCA3Q99618 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.22■□□□□ 0.35
CDCA3Q99618 BOLA2P3-201ENST00000404566 256 ntBASIC17.22■□□□□ 0.35
CDCA3Q99618 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.22■□□□□ 0.35
CDCA3Q99618 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.22■□□□□ 0.35
CDCA3Q99618 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.22■□□□□ 0.35
CDCA3Q99618 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.22■□□□□ 0.35
CDCA3Q99618 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 AC020765.3-201ENST00000613051 740 ntBASIC17.22■□□□□ 0.35
CDCA3Q99618 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDCA3Q99618 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CDCA3Q99618 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDCA3Q99618 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDCA3Q99618 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDCA3Q99618 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.21■□□□□ 0.35
CDCA3Q99618 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms