Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 GPAA1P2-202ENST00000606848 1787 ntBASIC17.03■□□□□ 0.32
NOTCH4Q99466 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 AC098850.1-201ENST00000419919 790 ntBASIC17.03■□□□□ 0.32
NOTCH4Q99466 AC114501.2-201ENST00000439631 535 ntBASIC17.03■□□□□ 0.32
NOTCH4Q99466 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.02■□□□□ 0.32
NOTCH4Q99466 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NOTCH4Q99466 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.02■□□□□ 0.32
NOTCH4Q99466 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.02■□□□□ 0.32
NOTCH4Q99466 AC139713.2-201ENST00000641328 2723 ntBASIC17.02■□□□□ 0.32
NOTCH4Q99466 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.02■□□□□ 0.31
NOTCH4Q99466 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.02■□□□□ 0.31
NOTCH4Q99466 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NOTCH4Q99466 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 DFFBP1-201ENST00000433250 979 ntBASIC17.01■□□□□ 0.31
NOTCH4Q99466 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AL645608.8-201ENST00000606034 2086 ntBASIC17.01■□□□□ 0.31
NOTCH4Q99466 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AL589987.1-201ENST00000453380 819 ntBASIC17.01■□□□□ 0.31
NOTCH4Q99466 RN7SL618P-201ENST00000477850 296 ntBASIC17.01■□□□□ 0.31
NOTCH4Q99466 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AC008494.3-201ENST00000606615 944 ntBASIC17.01■□□□□ 0.31
NOTCH4Q99466 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.01■□□□□ 0.31
NOTCH4Q99466 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms