Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 VENTXP7-201ENST00000475503 772 ntBASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 AC114341.1-201ENST00000618070 349 ntBASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 KRT8P49-201ENST00000604166 1432 ntBASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHAMP1Q96JM3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 AP001269.4-201ENST00000609611 512 ntBASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 GGT4P-201ENST00000623672 1708 ntBASIC19.45■□□□□ 0.7
CHAMP1Q96JM3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms