Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFT43Q96FT9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFT43Q96FT9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IFT43Q96FT9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFT43Q96FT9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFT43Q96FT9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 AL590787.1-201ENST00000568856 1315 ntBASIC17.33■□□□□ 0.36
IFT43Q96FT9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 KRT18P3-201ENST00000451602 1288 ntBASIC17.33■□□□□ 0.36
IFT43Q96FT9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 AC005593.1-201ENST00000624894 515 ntBASIC17.33■□□□□ 0.36
IFT43Q96FT9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
IFT43Q96FT9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFT43Q96FT9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 AC136632.2-201ENST00000512891 861 ntBASIC17.32■□□□□ 0.36
IFT43Q96FT9 AC040169.1-201ENST00000565382 521 ntBASIC17.32■□□□□ 0.36
IFT43Q96FT9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT43Q96FT9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
IFT43Q96FT9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 AC073621.1-201ENST00000392730 636 ntBASIC17.31■□□□□ 0.36
IFT43Q96FT9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.31■□□□□ 0.36
IFT43Q96FT9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 AC009947.1-201ENST00000444350 727 ntBASIC17.31■□□□□ 0.36
IFT43Q96FT9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 RNA5SP416-201ENST00000516838 111 ntBASIC17.31■□□□□ 0.36
IFT43Q96FT9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms