Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 AF186996.4-201ENST00000467186 377 ntBASIC17.73■□□□□ 0.43
TRIM11Q96F44 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 IGHV3-65-201ENST00000523210 341 ntBASIC17.73■□□□□ 0.43
TRIM11Q96F44 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 AC105339.3-201ENST00000560043 636 ntBASIC17.73■□□□□ 0.43
TRIM11Q96F44 CYP2A7P1-201ENST00000595391 815 ntBASIC17.73■□□□□ 0.43
TRIM11Q96F44 AL121912.1-201ENST00000603683 238 ntBASIC17.73■□□□□ 0.43
TRIM11Q96F44 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM11Q96F44 MTHFR-217ENST00000641820 1569 ntBASIC17.73■□□□□ 0.43
TRIM11Q96F44 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 SLC22A20-204ENST00000530038 1673 ntBASIC17.72■□□□□ 0.43
TRIM11Q96F44 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 PMS2P1-201ENST00000431037 1228 ntBASIC17.72■□□□□ 0.43
TRIM11Q96F44 AC018712.1-201ENST00000455767 687 ntBASIC17.72■□□□□ 0.43
TRIM11Q96F44 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 AL356488.2-201ENST00000602755 427 ntBASIC17.72■□□□□ 0.43
TRIM11Q96F44 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 AC005593.1-201ENST00000624894 515 ntBASIC17.72■□□□□ 0.43
TRIM11Q96F44 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 AL512652.2-201ENST00000625156 1716 ntBASIC17.72■□□□□ 0.43
TRIM11Q96F44 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM11Q96F44 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM11Q96F44 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 AL513523.2-202ENST00000427283 2040 ntBASIC17.71■□□□□ 0.43
TRIM11Q96F44 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.71■□□□□ 0.43
TRIM11Q96F44 KRT18P67-201ENST00000432816 1264 ntBASIC17.71■□□□□ 0.43
TRIM11Q96F44 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 FAM197Y8-203ENST00000450145 560 ntBASIC17.71■□□□□ 0.43
TRIM11Q96F44 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 UNC93B7-201ENST00000509439 705 ntBASIC17.71■□□□□ 0.43
TRIM11Q96F44 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM11Q96F44 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM11Q96F44 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms