Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRF1Q92994 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.73■□□□□ 0.75
BRF1Q92994 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRF1Q92994 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF1Q92994 PRSS29P-201ENST00000440800 595 ntBASIC19.73■□□□□ 0.75
BRF1Q92994 FAM185BP-201ENST00000443595 716 ntBASIC19.73■□□□□ 0.75
BRF1Q92994 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.73■□□□□ 0.75
BRF1Q92994 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.73■□□□□ 0.75
BRF1Q92994 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
BRF1Q92994 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.73■□□□□ 0.75
BRF1Q92994 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.73■□□□□ 0.75
BRF1Q92994 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF1Q92994 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.73■□□□□ 0.75
BRF1Q92994 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.73■□□□□ 0.75
BRF1Q92994 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF1Q92994 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.73■□□□□ 0.75
BRF1Q92994 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
BRF1Q92994 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF1Q92994 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.73■□□□□ 0.75
BRF1Q92994 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF1Q92994 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF1Q92994 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.73■□□□□ 0.75
BRF1Q92994 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.72■□□□□ 0.75
BRF1Q92994 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.72■□□□□ 0.75
BRF1Q92994 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.72■□□□□ 0.75
BRF1Q92994 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
BRF1Q92994 KRT8P39-201ENST00000396270 1433 ntBASIC19.72■□□□□ 0.75
BRF1Q92994 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.72■□□□□ 0.75
BRF1Q92994 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.72■□□□□ 0.75
BRF1Q92994 AC087641.1-201ENST00000557561 1021 ntBASIC19.72■□□□□ 0.75
BRF1Q92994 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.72■□□□□ 0.75
BRF1Q92994 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.72■□□□□ 0.75
BRF1Q92994 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.72■□□□□ 0.75
BRF1Q92994 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.72■□□□□ 0.75
BRF1Q92994 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF1Q92994 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF1Q92994 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.71■□□□□ 0.75
BRF1Q92994 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.71■□□□□ 0.75
BRF1Q92994 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.71■□□□□ 0.75
BRF1Q92994 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
BRF1Q92994 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
BRF1Q92994 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 IGLL3P-201ENST00000412472 434 ntBASIC19.71■□□□□ 0.75
BRF1Q92994 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
BRF1Q92994 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.71■□□□□ 0.75
BRF1Q92994 FDX1P1-201ENST00000449115 551 ntBASIC19.71■□□□□ 0.75
BRF1Q92994 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
BRF1Q92994 AC079776.4-201ENST00000511039 504 ntBASIC19.71■□□□□ 0.75
BRF1Q92994 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.71■□□□□ 0.75
BRF1Q92994 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.71■□□□□ 0.75
BRF1Q92994 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
BRF1Q92994 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.71■□□□□ 0.75
BRF1Q92994 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.71■□□□□ 0.75
BRF1Q92994 AC006449.5-201ENST00000610658 2098 ntBASIC19.71■□□□□ 0.75
BRF1Q92994 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRF1Q92994 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRF1Q92994 DOC2GP-204ENST00000639052 2548 ntBASIC19.7■□□□□ 0.74
BRF1Q92994 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRF1Q92994 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRF1Q92994 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.7■□□□□ 0.74
BRF1Q92994 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRF1Q92994 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRF1Q92994 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.7■□□□□ 0.74
BRF1Q92994 VN2R19P-201ENST00000442399 1052 ntBASIC19.7■□□□□ 0.74
BRF1Q92994 CXCL1P1-201ENST00000502804 216 ntBASIC19.7■□□□□ 0.74
BRF1Q92994 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.7■□□□□ 0.74
BRF1Q92994 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.7■□□□□ 0.74
BRF1Q92994 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms