Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.44■□□□□ 0.06
HPS1Q92902 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.44■□□□□ 0.06
HPS1Q92902 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.44■□□□□ 0.06
HPS1Q92902 TSPY22P-201ENST00000427496 604 ntBASIC15.44■□□□□ 0.06
HPS1Q92902 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.44■□□□□ 0.06
HPS1Q92902 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.44■□□□□ 0.06
HPS1Q92902 MIR3180-1-201ENST00000580374 94 ntBASIC15.44■□□□□ 0.06
HPS1Q92902 MIR3180-3-201ENST00000584616 94 ntBASIC15.44■□□□□ 0.06
HPS1Q92902 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.44■□□□□ 0.06
HPS1Q92902 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 AC024563.2-201ENST00000603282 481 ntBASIC15.44■□□□□ 0.06
HPS1Q92902 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.44■□□□□ 0.06
HPS1Q92902 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
HPS1Q92902 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
HPS1Q92902 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HPS1Q92902 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HPS1Q92902 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.43■□□□□ 0.06
HPS1Q92902 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.43■□□□□ 0.06
HPS1Q92902 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 FAM45BP-202ENST00000592932 1624 ntBASIC15.43■□□□□ 0.06
HPS1Q92902 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HPS1Q92902 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 FAAHP1-202ENST00000446499 1238 ntBASIC15.43■□□□□ 0.06
HPS1Q92902 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 AP002414.4-201ENST00000589764 1148 ntBASIC15.43■□□□□ 0.06
HPS1Q92902 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.43■□□□□ 0.06
HPS1Q92902 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 AC012313.10-201ENST00000623509 926 ntBASIC15.43■□□□□ 0.06
HPS1Q92902 KRT89P-201ENST00000620027 1478 ntBASIC15.43■□□□□ 0.06
HPS1Q92902 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.43■□□□□ 0.06
HPS1Q92902 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 SDHAP2-201ENST00000455183 2001 ntBASIC15.43■□□□□ 0.06
HPS1Q92902 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.43■□□□□ 0.06
HPS1Q92902 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS1Q92902 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS1Q92902 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS1Q92902 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HPS1Q92902 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS1Q92902 DRAXINP1-201ENST00000437611 948 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms