Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 AC025580.3-201ENST00000617932 1424 ntBASIC15.87■□□□□ 0.13
TM9SF4Q92544 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TM9SF4Q92544 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.87■□□□□ 0.13
TM9SF4Q92544 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 FLJ38576-201ENST00000623820 2459 ntBASIC15.86■□□□□ 0.13
TM9SF4Q92544 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 AC004835.2-201ENST00000603762 682 ntBASIC15.86■□□□□ 0.13
TM9SF4Q92544 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TM9SF4Q92544 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TM9SF4Q92544 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 AC068137.2-201ENST00000605408 478 ntBASIC15.85■□□□□ 0.13
TM9SF4Q92544 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
TM9SF4Q92544 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TM9SF4Q92544 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms