Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 AL121956.5-201ENST00000625261 221 ntBASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BBS1Q8NFJ9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AC243591.1-201ENST00000452967 1364 ntBASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 IGHV3-47-201ENST00000425060 335 ntBASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 DRAXINP1-201ENST00000437611 948 ntBASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 FAM86EP-206ENST00000510506 987 ntBASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AP002414.4-201ENST00000589764 1148 ntBASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AC114341.1-201ENST00000618070 349 ntBASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AC006277.1-201ENST00000624348 1610 ntBASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.13■□□□□ 0.01
BBS1Q8NFJ9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 LINC00265-3P-201ENST00000447588 903 ntBASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 AL671710.1-201ENST00000610245 2349 ntBASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BBS1Q8NFJ9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms