Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIML2Q8N7C3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 AC092171.3-201ENST00000610122 2651 ntBASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 KLF4P1-201ENST00000412782 1185 ntBASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 AC011467.2-201ENST00000598425 242 ntBASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIML2Q8N7C3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 AL135999.2-201ENST00000622438 1686 ntBASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 NTF6B-201ENST00000591913 560 ntBASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms