Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST3Q8N1M1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST3Q8N1M1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BEST3Q8N1M1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST3Q8N1M1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
BEST3Q8N1M1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 AC004835.2-201ENST00000603762 682 ntBASIC15.57■□□□□ 0.08
BEST3Q8N1M1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 AC012569.1-201ENST00000591191 1524 ntBASIC15.57■□□□□ 0.08
BEST3Q8N1M1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.57■□□□□ 0.08
BEST3Q8N1M1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 HMGA1P7-201ENST00000406908 502 ntBASIC15.56■□□□□ 0.08
BEST3Q8N1M1 AC004461.1-201ENST00000412461 403 ntBASIC15.56■□□□□ 0.08
BEST3Q8N1M1 AL355306.1-201ENST00000415580 579 ntBASIC15.56■□□□□ 0.08
BEST3Q8N1M1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 TIMM8BP1-201ENST00000452384 211 ntBASIC15.56■□□□□ 0.08
BEST3Q8N1M1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 AC022145.2-201ENST00000598203 171 ntBASIC15.56■□□□□ 0.08
BEST3Q8N1M1 AL355385.1-201ENST00000606123 409 ntBASIC15.56■□□□□ 0.08
BEST3Q8N1M1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 AC099522.2-201ENST00000607001 744 ntBASIC15.56■□□□□ 0.08
BEST3Q8N1M1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 AL353732.1-201ENST00000569618 1459 ntBASIC15.56■□□□□ 0.08
BEST3Q8N1M1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
BEST3Q8N1M1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BEST3Q8N1M1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
BEST3Q8N1M1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
BEST3Q8N1M1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BEST3Q8N1M1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.55■□□□□ 0.08
BEST3Q8N1M1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BEST3Q8N1M1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BEST3Q8N1M1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms