Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.08■□□□□ 0.17
RAB43Q86YS6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 ACTG1P14-201ENST00000446382 1122 ntBASIC16.08■□□□□ 0.16
RAB43Q86YS6 AC074386.1-202ENST00000463561 864 ntBASIC16.08■□□□□ 0.16
RAB43Q86YS6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 OR7E47P-204ENST00000575924 449 ntBASIC16.08■□□□□ 0.16
RAB43Q86YS6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAB43Q86YS6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RAB43Q86YS6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 CNN2P11-201ENST00000429351 262 ntBASIC16.07■□□□□ 0.16
RAB43Q86YS6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 AC025580.3-201ENST00000617932 1424 ntBASIC16.07■□□□□ 0.16
RAB43Q86YS6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RAB43Q86YS6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB43Q86YS6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 KRT18P28-201ENST00000453838 1332 ntBASIC16.06■□□□□ 0.16
RAB43Q86YS6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 FAM58CP-201ENST00000435741 640 ntBASIC16.06■□□□□ 0.16
RAB43Q86YS6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms