Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 AC009477.1-201ENST00000452936 217 ntBASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 AC009118.2-201ENST00000613275 655 ntBASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 AC022211.2-201ENST00000585075 2527 ntBASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAI1Q7Z5J4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 COX5BP8-201ENST00000416911 349 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 AC007274.1-201ENST00000439805 662 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 RARRES2P9-201ENST00000565168 469 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 AC004790.1-201ENST00000612686 536 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 TEX28P1-201ENST00000613479 1221 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 TEX28P2-201ENST00000617764 1221 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 KRT18P34-201ENST00000488218 1270 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 AC027369.6-201ENST00000525520 931 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 AL844908.2-201ENST00000609461 460 ntBASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAI1Q7Z5J4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAI1Q7Z5J4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms