Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 AC012313.1-201ENST00000593393 3059 ntBASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 IGHV3-71-201ENST00000523324 359 ntBASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 HTR7P1-202ENST00000624664 4411 ntBASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDCP2Q5VXM1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 AL391825.1-201ENST00000457671 1364 ntBASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 DGCR5-201ENST00000399539 862 ntBASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 GNAQP1-201ENST00000444815 1067 ntBASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 GIMAP3P-201ENST00000495150 836 ntBASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 IGHV3-72-202ENST00000621503 303 ntBASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 AC138932.1-201ENST00000534164 6830 ntBASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 AC106820.2-201ENST00000563775 3264 ntBASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 AL138688.1-201ENST00000624851 1594 ntBASIC15.79■□□□□ 0.12
CDCP2Q5VXM1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDCP2Q5VXM1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDCP2Q5VXM1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDCP2Q5VXM1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDCP2Q5VXM1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.78■□□□□ 0.12
CDCP2Q5VXM1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDCP2Q5VXM1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms