Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 TMEM261P1-201ENST00000604899 340 ntBASIC20.83■□□□□ 0.93
RC3H1Q5TC82 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.83■□□□□ 0.93
RC3H1Q5TC82 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RC3H1Q5TC82 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RC3H1Q5TC82 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.83■□□□□ 0.92
RC3H1Q5TC82 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
RC3H1Q5TC82 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RC3H1Q5TC82 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 AC007389.4-201ENST00000454674 793 ntBASIC20.82■□□□□ 0.92
RC3H1Q5TC82 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 AP005482.1-201ENST00000563722 1273 ntBASIC20.82■□□□□ 0.92
RC3H1Q5TC82 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 AC020765.3-201ENST00000613051 740 ntBASIC20.82■□□□□ 0.92
RC3H1Q5TC82 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 NOC2LP1-202ENST00000452600 2235 ntBASIC20.82■□□□□ 0.92
RC3H1Q5TC82 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RC3H1Q5TC82 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 AC092658.1-201ENST00000505836 891 ntBASIC20.81■□□□□ 0.92
RC3H1Q5TC82 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RC3H1Q5TC82 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 TMEM14DP-201ENST00000422205 345 ntBASIC20.8■□□□□ 0.92
RC3H1Q5TC82 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 WFDC1-204ENST00000613603 549 ntBASIC20.8■□□□□ 0.92
RC3H1Q5TC82 COX11-210ENST00000639671 696 ntBASIC20.8■□□□□ 0.92
RC3H1Q5TC82 AL033527.4-201ENST00000641026 673 ntBASIC20.8■□□□□ 0.92
RC3H1Q5TC82 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms