Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 TSEN15P1-201ENST00000423257 515 ntBASIC23.02■■□□□ 1.28
CDCA8Q53HL2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 HLA-J-203ENST00000494367 1087 ntBASIC23.02■■□□□ 1.28
CDCA8Q53HL2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 AC105233.2-201ENST00000523697 349 ntBASIC23.02■■□□□ 1.28
CDCA8Q53HL2 AF228730.5-201ENST00000530288 346 ntBASIC23.02■■□□□ 1.28
CDCA8Q53HL2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC23.02■■□□□ 1.28
CDCA8Q53HL2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC23.02■■□□□ 1.28
CDCA8Q53HL2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
CDCA8Q53HL2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 AL031731.1-201ENST00000642131 2094 ntBASIC23.01■■□□□ 1.27
CDCA8Q53HL2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 KRT18P32-201ENST00000424695 1287 ntBASIC23.01■■□□□ 1.27
CDCA8Q53HL2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 AP000842.3-202ENST00000569238 1080 ntBASIC23.01■■□□□ 1.27
CDCA8Q53HL2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 GPAA1P2-202ENST00000606848 1787 ntBASIC23.01■■□□□ 1.27
CDCA8Q53HL2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA8Q53HL2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
CDCA8Q53HL2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC23■■□□□ 1.27
CDCA8Q53HL2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC23■■□□□ 1.27
CDCA8Q53HL2 AC078925.2-201ENST00000624013 1973 ntBASIC23■■□□□ 1.27
CDCA8Q53HL2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC23■■□□□ 1.27
CDCA8Q53HL2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC23■■□□□ 1.27
CDCA8Q53HL2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC23■■□□□ 1.27
CDCA8Q53HL2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC23■■□□□ 1.27
CDCA8Q53HL2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC23■■□□□ 1.27
CDCA8Q53HL2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDCA8Q53HL2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC23■■□□□ 1.27
CDCA8Q53HL2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC23■■□□□ 1.27
CDCA8Q53HL2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC23■■□□□ 1.27
CDCA8Q53HL2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CDCA8Q53HL2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC23■■□□□ 1.27
CDCA8Q53HL2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
CDCA8Q53HL2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23■■□□□ 1.27
CDCA8Q53HL2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC23■■□□□ 1.27
CDCA8Q53HL2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA8Q53HL2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
CDCA8Q53HL2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 PMS2P2-201ENST00000425039 1128 ntBASIC22.99■■□□□ 1.27
CDCA8Q53HL2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 METTL21AP1-201ENST00000438852 635 ntBASIC22.99■■□□□ 1.27
CDCA8Q53HL2 PRYP6-201ENST00000514804 343 ntBASIC22.99■■□□□ 1.27
CDCA8Q53HL2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC22.99■■□□□ 1.27
CDCA8Q53HL2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms