Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 AC004461.1-201ENST00000412461 403 ntBASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 AC004835.2-201ENST00000603762 682 ntBASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 AC079328.2-201ENST00000561241 3354 ntBASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC144BQ3MJ40 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 AC092919.2-201ENST00000623631 1645 ntBASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 ACTL9-202ENST00000612068 1252 ntBASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC144BQ3MJ40 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 AL513480.1-201ENST00000451731 511 ntBASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 REXO1L3P-201ENST00000622202 1288 ntBASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC144BQ3MJ40 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms