Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
IRX4P78413 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
IRX4P78413 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IRX4P78413 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.5■□□□□ 0.39
IRX4P78413 FAM8A3P-201ENST00000427218 844 ntBASIC17.5■□□□□ 0.39
IRX4P78413 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.5■□□□□ 0.39
IRX4P78413 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.5■□□□□ 0.39
IRX4P78413 AP002472.1-201ENST00000577490 586 ntBASIC17.5■□□□□ 0.39
IRX4P78413 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
IRX4P78413 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.5■□□□□ 0.39
IRX4P78413 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IRX4P78413 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.5■□□□□ 0.39
IRX4P78413 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
IRX4P78413 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.5■□□□□ 0.39
IRX4P78413 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.5■□□□□ 0.39
IRX4P78413 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
IRX4P78413 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IRX4P78413 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
IRX4P78413 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IRX4P78413 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
IRX4P78413 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX4P78413 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.49■□□□□ 0.39
IRX4P78413 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
IRX4P78413 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.49■□□□□ 0.39
IRX4P78413 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
IRX4P78413 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.49■□□□□ 0.39
IRX4P78413 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
IRX4P78413 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
IRX4P78413 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
IRX4P78413 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX4P78413 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.49■□□□□ 0.39
IRX4P78413 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IRX4P78413 PCDHB19P-201ENST00000570871 2371 ntBASIC17.48■□□□□ 0.39
IRX4P78413 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
IRX4P78413 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
IRX4P78413 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.48■□□□□ 0.39
IRX4P78413 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
IRX4P78413 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.48■□□□□ 0.39
IRX4P78413 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.48■□□□□ 0.39
IRX4P78413 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX4P78413 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX4P78413 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
IRX4P78413 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.48■□□□□ 0.39
IRX4P78413 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.48■□□□□ 0.39
IRX4P78413 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX4P78413 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.48■□□□□ 0.39
IRX4P78413 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX4P78413 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX4P78413 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.48■□□□□ 0.39
IRX4P78413 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
IRX4P78413 AC018845.2-201ENST00000568326 409 ntBASIC17.48■□□□□ 0.39
IRX4P78413 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
IRX4P78413 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.48■□□□□ 0.39
IRX4P78413 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
IRX4P78413 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
IRX4P78413 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms